Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2181

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2181: 10549 - K11423 SETD2, SET2 histone-lysine N-methyltransferase SETD2, at 278274 to 281386 10549

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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277,633 + 0.7
277,642 - 2.0
277,650 - -1.2
277,665 + 0.9
278,073 + 1.1
278,075 + 0.9
278,085 + -0.1
278,129 + 2.0
278,383 - 0.7
278,385 - 1.2
278,490 + -0.3
278,510 - 0.4
278,516 + -0.1
278,528 - 1.5
278,531 - 0.4
278,784 - 10549 mRNA_2181 0.16 0.1
278,841 + 10549 mRNA_2181 0.18 0.8
279,128 - 10549 mRNA_2181 0.27 0.1
279,249 + 10549 mRNA_2181 0.31 0.5
279,449 - 10549 mRNA_2181 0.38 1.7
279,515 - 10549 mRNA_2181 0.40 1.5
279,528 + 10549 mRNA_2181 0.40 0.6
279,994 - 10549 mRNA_2181 0.55 0.9
280,115 - 10549 mRNA_2181 0.59 2.1
280,144 + 10549 mRNA_2181 0.60 -1.1
280,165 + 10549 mRNA_2181 0.61 1.3
280,173 - 10549 mRNA_2181 0.61 0.4
280,400 - 10549 mRNA_2181 0.68 1.2
280,556 - 10549 mRNA_2181 0.73 1.4
280,579 + 10549 mRNA_2181 0.74 -0.8
280,871 - 10549 mRNA_2181 0.83 0.7
281,110 + -0.8
281,340 + 1.8
281,364 - 2.7
281,396 - 1.4
281,408 + -0.5
281,418 - -0.0
281,451 - 0.2
281,469 + 0.4
281,476 - -1.2
281,479 + 0.4
281,486 - 0.4
281,488 + 0.0
281,498 + -1.5
281,499 + 0.4
281,515 - 0.7
281,748 + 0.8
281,795 - 0.9
281,801 - 0.6
281,924 - 1.4
282,256 + 1.1
282,373 - 0.5
282,379 + 0.3