Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2165

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2164: 10532 - K10736 MCM10 minichromosome maintenance protein 10, at 230193 to 233259 10532 mRNA_2165: 10533 - Hypothetical Protein, at 233429 to 233973 10533 mRNA_2166: 10534 - Hypothetical Protein, at 234700 to 236014 10534

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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233,312 - 0.8
233,317 - -0.9
233,337 + 0.4
233,342 + 0.3
233,344 - 0.2
233,351 - 0.5
233,354 - 0.4
233,357 + 0.0
233,358 + -0.2
233,359 - 0.1
233,369 + -0.4
233,369 + 0.4
233,372 - 0.9
233,375 + -0.2
233,447 - -0.1
233,487 - 10533 mRNA_2165 0.11 1.5
233,499 - 10533 mRNA_2165 0.13 1.1
233,525 - 10533 mRNA_2165 0.18 0.1
233,529 + 10533 mRNA_2165 0.18 2.1
233,624 + 10533 mRNA_2165 0.36 0.0
233,636 - 10533 mRNA_2165 0.38 -0.4
233,667 - 10533 mRNA_2165 0.44 -0.2
233,686 - 10533 mRNA_2165 0.47 0.9
233,691 + 10533 mRNA_2165 0.48 -0.2
233,731 + 10533 mRNA_2165 0.55 0.6
233,793 - 10533 mRNA_2165 0.67 0.7
233,803 + 10533 mRNA_2165 0.69 0.9
234,097 + -0.1
234,099 - -1.1
234,115 + 0.5
234,188 - -0.1
234,279 + -0.9
234,406 - 0.4
234,413 + 0.2
234,493 - 0.4
234,811 - 0.1
234,826 - 0.3
234,834 - 10534 mRNA_2166 0.10 0.4
234,834 - 10534 mRNA_2166 0.10 1.1