Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2156

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2155: 10523 - Hypothetical Protein, at 204490 to 205403 10523 mRNA_2156: 10524 - Hypothetical Protein, at 205940 to 207081 10524 mRNA_2157: 10525 - Hypothetical Protein, at 207525 to 208737 10525

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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205,122 + 10523 mRNA_2155 0.69 0.9
205,131 - 10523 mRNA_2155 0.70 -0.2
205,178 + 10523 mRNA_2155 0.75 0.3
205,210 + 10523 mRNA_2155 0.79 0.7
205,302 + 10523 mRNA_2155 0.89 0.3
205,453 - -0.1
205,556 + -1.0
205,635 + 0.2
205,705 - 2.4
205,740 + 1.5
205,740 + -0.3
205,749 + 0.7
206,047 + 0.8
206,450 - 10524 mRNA_2156 0.45 0.0
206,570 - 10524 mRNA_2156 0.55 -0.0
206,632 + 10524 mRNA_2156 0.61 0.8
206,739 - 10524 mRNA_2156 0.70 0.5
206,764 - 10524 mRNA_2156 0.72 0.2
206,895 + 10524 mRNA_2156 0.84 -0.1
206,900 + 10524 mRNA_2156 0.84 0.1
206,996 - 1.2
207,002 - 0.5
207,007 - -0.0
207,026 + -0.2
207,046 - -0.1
207,058 + 0.5
207,061 + 0.6
207,081 - -1.2
207,082 - 1.5
207,096 - 0.3
207,100 - -0.0
207,101 + 0.1
207,109 + 0.7
207,109 + 0.4
207,112 - 0.1
207,115 - 0.2
207,123 - 0.7
207,131 - -1.7
207,134 - 0.4
207,150 - 0.3
207,153 + -0.1
207,154 - -0.1
207,163 - -1.3
207,171 + 0.3
207,277 - -0.3
207,337 + -0.2
208,045 + 10525 mRNA_2157 0.43 0.5
208,075 - 10525 mRNA_2157 0.45 1.3