Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2129

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2128: 10496 - Hypothetical Protein, at 135879 to 136766 10496 mRNA_2129: 10497 - K17741 GRE2 NADPH-dependent methylglyoxal reductase, at 136937 to 138468 10497 mRNA_2130: 10498 - Hypothetical Protein, at 138636 to 139652 10498

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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136,482 - 10496 mRNA_2128 0.68 0.2
136,566 + 10496 mRNA_2128 0.77 1.2
136,609 + 10496 mRNA_2128 0.82 -0.2
136,721 - -0.1
136,739 - 1.3
136,783 - 0.5
136,923 + 0.1
137,034 - 1.0
137,035 + 0.8
137,059 - 1.4
137,252 + 10497 mRNA_2129 0.21 0.1
137,252 + 10497 mRNA_2129 0.21 -0.1
137,381 + 10497 mRNA_2129 0.29 -2.2
137,628 - 10497 mRNA_2129 0.45 -1.4
137,667 + 10497 mRNA_2129 0.48 0.7
137,671 + 10497 mRNA_2129 0.48 0.2
137,809 + 10497 mRNA_2129 0.57 0.5
138,020 - 10497 mRNA_2129 0.71 -0.6
138,100 - 10497 mRNA_2129 0.76 -0.3
138,106 + 10497 mRNA_2129 0.76 0.3
138,266 + 10497 mRNA_2129 0.87 0.4
138,533 + 0.6
138,654 + 0.6
138,657 + 0.7
138,706 - -0.6
138,981 - 10498 mRNA_2130 0.34 0.5
138,996 + 10498 mRNA_2130 0.35 0.6
139,209 + 10498 mRNA_2130 0.56 -1.8
139,405 - 10498 mRNA_2130 0.76 -0.5