Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2119

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2118: 10486 - KOG0254 Predicted transporter (major facilitator superfamily), at 114569 to 117029 10486 mRNA_2119: 10487 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 117592 to 119082 10487 mRNA_2120: 10488 - Hypothetical Protein, at 119780 to 121101 10488

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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116,790 + 0.4
116,790 + 0.6
117,160 - 0.1
117,179 + 0.3
117,179 + 1.7
117,193 + 0.2
117,193 + -0.3
117,196 + -0.1
117,239 - 0.1
117,314 - 1.6
117,319 + 0.1
117,319 + 0.1
117,338 + 1.8
117,339 - 0.5
117,341 + 0.8
117,397 + 0.4
117,458 - 0.4
117,538 - 0.4
117,541 - 0.4
117,542 - 1.4
117,565 + -0.8
117,587 - -0.1
117,588 - 0.7
117,824 - 10487 mRNA_2119 0.16 0.1
117,833 + 10487 mRNA_2119 0.16 0.3
117,863 + 10487 mRNA_2119 0.18 2.1
117,866 - 10487 mRNA_2119 0.18 0.5
117,929 + 10487 mRNA_2119 0.23 0.2
118,301 + 10487 mRNA_2119 0.48 0.0
118,309 - 10487 mRNA_2119 0.48 0.0
118,489 + 10487 mRNA_2119 0.60 -0.0
118,836 - 10487 mRNA_2119 0.83 0.4
118,938 - 1.1
119,571 + 0.5
120,046 + 10488 mRNA_2120 0.20 -0.8