Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2099

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2098: 10466 - Hypothetical Protein, at 63765 to 64899 10466 mRNA_2099: 10467 - HMMPfam-PWWP domain-PF00855,SUPERFAMILY--SSF63748, at 65329 to 67842 10467 mRNA_2100: 10468 - K13184 DHX9 ATP-dependent RNA helicase A, at 68093 to 72993 10468

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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64,464 - 10466 mRNA_2098 0.62 -0.1
64,467 - 10466 mRNA_2098 0.62 0.3
64,518 - 10466 mRNA_2098 0.66 1.9
64,544 + 10466 mRNA_2098 0.69 -0.8
64,714 + 10466 mRNA_2098 0.84 -0.7
64,852 - 0.8
64,893 + 0.7
65,255 + 1.3
65,327 + 0.4
65,402 + 0.2
65,503 + -1.0
65,560 + 0.1
65,660 + 10467 mRNA_2099 0.13 0.7
65,736 + 10467 mRNA_2099 0.16 1.2
65,739 - 10467 mRNA_2099 0.16 1.2
65,837 - 10467 mRNA_2099 0.20 0.9
65,981 - 10467 mRNA_2099 0.26 -0.2
67,014 - 10467 mRNA_2099 0.67 0.7
67,149 + 10467 mRNA_2099 0.72 0.3
67,640 - 0.5
67,662 + 0.2
67,752 + -0.9
67,771 - -0.2
67,789 + 0.7
67,847 + 0.4
67,894 - 0.8
67,900 - 0.1
67,903 - -1.8
67,907 + -1.8
68,035 - 1.9
68,064 + 0.3
68,077 - 0.7
68,169 - -0.4
68,338 - -0.0