Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2074

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2073: 10441 - Hypothetical Protein, at 8998 to 9576 10441 mRNA_2074: 10442 - HMMPfam-Chromate transporter-PF02417, at 9879 to 11848 10442

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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8,884 - 1.0
8,887 + -0.5
8,889 + -0.3
8,899 - 1.1
8,902 + 0.2
8,904 + 0.0
9,068 - 10441 mRNA_2073 0.12 0.1
9,479 + 10441 mRNA_2073 0.83 1.2
9,483 - 10441 mRNA_2073 0.84 -0.2
9,487 - 10441 mRNA_2073 0.84 0.5
9,623 + 0.3
9,739 - 1.3
9,785 - 0.0
9,788 - 0.3
9,788 - -1.2
9,936 + 0.3
10,090 - 10442 mRNA_2074 0.11 1.0
10,272 + 10442 mRNA_2074 0.20 1.5
11,852 - -0.2
12,047 + 0.7
12,269 - 0.6
12,274 + -0.7
12,274 - 0.3
12,281 - 1.5
12,287 + 1.5
12,292 + 0.4
12,420 + 0.5
12,431 + -0.0
12,581 - 0.4