Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1923

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1921: 10289 - KOG4373 Predicted 3'-5' exonuclease, at 517842 to 518810 10289 mRNA_1922: 10290 - Hypothetical Protein, at 518847 to 519239 10290 mRNA_1923: 10291 - K19787 CARNMT1 carnosine N-methyltransferase, at 519459 to 521071 10291 mRNA_1924: 10292 - K00763 pncB, NAPRT1 nicotinate phosphoribosyltransferase, at 521294 to 523495 10292

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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518,611 - 10289 mRNA_1921 0.79 0.9
518,615 - 10289 mRNA_1921 0.80 0.2
518,936 - 10290 mRNA_1922 0.23 -0.4
519,163 - 10290 mRNA_1922 0.80 -0.1
519,377 - 0.3
519,674 + 10291 mRNA_1923 0.13 0.8
520,262 - 10291 mRNA_1923 0.50 0.6
520,289 + 10291 mRNA_1923 0.51 0.1
520,403 + 10291 mRNA_1923 0.59 0.2
520,562 + 10291 mRNA_1923 0.68 -0.2
520,961 - 1.6
520,987 + 0.9
521,109 - 1.0
521,119 + -0.4
521,123 - 0.5
521,274 + 0.2
521,278 + -0.0
521,286 + 0.1
521,318 + 1.4
521,432 + 0.8
521,435 - 0.0
521,482 + 0.1
521,567 - 10292 mRNA_1924 0.12 0.7
521,726 - 10292 mRNA_1924 0.20 0.1
521,727 - 10292 mRNA_1924 0.20 0.4
521,757 + 10292 mRNA_1924 0.21 1.1
521,995 + 10292 mRNA_1924 0.32 -0.2