Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1841

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1841: 10209 - KOG4476 Gluconate transport-inducing protein, at 342756 to 344236 10209 mRNA_1842: 10210 - K08660 CNDP2 cytosolic nonspecific dipeptidase, at 344816 to 347199 10210

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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341,780 - 1.6
341,783 + 0.1
341,788 + 1.6
341,790 - 0.1
341,796 - -0.2
341,824 - 0.4
341,825 - 0.8
341,846 - -1.1
341,847 + 0.4
341,849 - 0.2
341,853 - 0.8
341,857 + 0.3
341,866 + 0.0
341,868 - 0.5
341,869 + -0.0
341,871 + -0.1
341,880 + 0.4
341,889 - -0.4
341,889 + 0.1
341,889 - 0.4
341,892 + 0.5
341,892 + -0.4
341,892 + -0.0
341,904 - 1.0
341,908 - 1.4
341,908 - 0.3
341,908 - -0.3
341,908 + -0.2
341,909 - -0.2
341,909 + -0.1
341,911 + -0.2
341,911 + 0.4
341,916 + 1.1
341,921 - 0.1
341,922 + 0.1
341,924 - -0.3
341,924 + -0.0
341,925 + -0.3
341,928 + 0.2
341,942 - 0.7
341,952 - 0.5
341,969 + -0.1
341,974 + -0.3
341,993 + -0.1
341,994 + 1.7
342,016 - 0.4
342,018 - -1.1
342,025 - 1.2
342,027 + 0.5
342,029 + 1.9
342,034 - 0.1
342,054 - -0.2
342,071 + -0.2
342,076 + 0.4
342,082 + -0.1
342,090 - 1.2
342,097 - 0.3
342,099 + -0.5
342,108 + 0.4
342,122 - 0.5
342,141 - 0.7
342,142 + 1.6
342,155 - 0.8
342,160 + 2.0
342,160 + 1.4
342,175 + 0.3
342,175 + 1.5
342,187 - -0.6
342,222 + -0.4
342,238 + -0.1
342,239 - -0.3
342,240 + 0.3
342,254 + 1.0
342,269 - -0.0
342,370 - -0.1
342,371 - -0.2
342,374 + 1.7
342,376 + 1.0
342,381 + -0.1
342,383 + -0.4
342,386 - 0.3
342,390 - 0.2
342,392 + -0.1
342,394 + 1.3
342,396 - 1.5
342,398 - -0.4
342,400 + 0.3
342,422 + 0.3
342,425 - 0.9
342,437 - -0.1
342,438 - -0.2
342,449 - 0.6
342,450 - 1.2
342,451 - 0.1
342,455 - -1.2
342,458 + -0.1
342,458 + 0.4
342,463 - 0.4
342,467 - 2.0
342,468 + -0.2
342,475 + 1.8
342,482 - -0.3
342,486 - 0.3
342,491 + 0.7
342,493 - 0.2
342,506 + -0.1
342,514 + 1.1
342,519 - 0.5
342,528 + 0.8
342,531 - -0.7
342,531 + 0.2
342,554 + 0.4
342,562 + -0.2
342,566 - 2.7
342,566 + 0.2
342,577 + 0.4
342,577 + 1.0
342,605 - 0.2
342,609 - 0.3
342,621 - 0.1
342,627 - 0.4
342,637 - 0.3
342,702 - 0.4
342,708 - -0.4
342,803 + 0.5
342,808 - -0.1
342,815 - 0.1
342,818 + 1.8
342,824 + 0.5
342,826 + 0.6
342,840 + 0.2
342,861 + 0.4
342,975 + 10209 mRNA_1841 0.15 -0.2
343,087 - 10209 mRNA_1841 0.22 0.4
343,121 + 10209 mRNA_1841 0.25 0.2
343,140 + 10209 mRNA_1841 0.26 0.3
343,284 - 10209 mRNA_1841 0.36 0.8
343,296 + 10209 mRNA_1841 0.36 0.7
343,539 + 10209 mRNA_1841 0.53 0.6
343,715 - 10209 mRNA_1841 0.65 1.7
344,164 - 0.3
344,262 - 1.0
344,331 - -0.3
344,560 - 1.4
344,567 + -0.8
344,583 - -0.8
344,590 - -0.4
344,610 - 1.1
344,643 - 0.5
344,653 + -0.2
344,691 + 0.5
344,693 - 1.7
344,704 + 0.3
344,704 - 1.5
344,727 + -0.6
344,748 + 0.7
344,863 - 0.6
345,015 + -0.2
345,034 - 0.3