Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1835

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1834: 10202 - Hypothetical Protein, at 323054 to 324268 10202 mRNA_1835: 10203 - K10601 SYVN1, HRD1 E3 ubiquitin-protein ligase synoviolin, at 324649 to 327501 10203

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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323,983 - 10202 mRNA_1834 0.76 0.9
324,373 - -0.0
324,383 - 0.6
324,813 + -0.2
325,115 - 10203 mRNA_1835 0.16 1.6
325,846 - 10203 mRNA_1835 0.42 2.5
326,323 - 10203 mRNA_1835 0.59 -0.2
326,473 + 10203 mRNA_1835 0.64 0.4
326,608 + 10203 mRNA_1835 0.69 0.7
326,877 + 10203 mRNA_1835 0.78 1.1
326,913 + 10203 mRNA_1835 0.79 -0.7
327,059 + 10203 mRNA_1835 0.84 -0.1
327,335 - 0.7
327,347 + 0.9
327,356 + 0.9
327,358 + 0.8
327,611 + 0.4
327,629 + 0.3
327,650 - 0.5
327,651 + -0.2
327,782 - 0.1
327,813 + 0.6
327,817 + 0.3
328,027 - -0.9
328,122 + 0.0
328,228 - -0.1
328,263 + -0.5