Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1824

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1823: 10191 - KOG3783 Uncharacterized conserved protein, at 298528 to 301287 10191 mRNA_1824: 10192 - Hypothetical Protein, at 301582 to 303988 10192 mRNA_1825: 10193 - KOG0039 Ferric reductase, NADH/NADPH oxidase and related proteins, at 304648 to 308455 10193

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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300,864 + 10191 mRNA_1823 0.85 1.0
300,926 - 10191 mRNA_1823 0.87 -0.3
301,161 + 0.7
301,201 + -0.2
301,314 + 1.0
301,325 - -1.1
301,336 - -0.5
301,475 - 0.4
301,485 + 0.7
301,503 - -0.6
301,504 - -0.2
301,505 + 1.1
301,510 - -0.2
301,608 - 1.1
301,649 - 1.5
301,665 + -1.1
301,682 + -0.8
302,762 + 10192 mRNA_1824 0.49 0.5
302,824 + 10192 mRNA_1824 0.52 0.8
302,958 + 10192 mRNA_1824 0.57 0.1
302,985 - 10192 mRNA_1824 0.58 -0.3
303,092 - 10192 mRNA_1824 0.63 0.3
303,169 - 10192 mRNA_1824 0.66 1.4
303,384 + 10192 mRNA_1824 0.75 1.4
303,612 - 10192 mRNA_1824 0.84 0.4
303,973 - 0.2
304,091 + -0.4
304,129 - -0.0
304,163 + 0.4
304,242 + -0.7
304,246 + 0.5
304,262 - -0.3
304,270 - 0.1
304,282 - 0.6
304,411 + 0.5
304,415 - 1.0
304,429 + -0.8
304,565 - 0.9
304,585 + 1.0
304,881 + 0.3