Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1821

Experiments: 40 hrs Median Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1820: 10188 - Hypothetical Protein, at 290979 to 291681 10188 mRNA_1821: 10189 - HMMPfam-Domain of unknown function (DUF2427)-PF10348,HMMPfam-Protein of unknown function (Ytp1)-PF10355, at 291714 to 294112 10189 mRNA_1822: 10190 - KOG0627 Heat shock transcription factor, at 294810 to 296545 10190

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
remove
290,806 + 0.6
290,952 - 0.4
291,258 - 10188 mRNA_1820 0.40 0.9
291,269 - 10188 mRNA_1820 0.41 0.5
291,271 - 10188 mRNA_1820 0.42 1.0
291,275 - 10188 mRNA_1820 0.42 0.6
291,276 - 10188 mRNA_1820 0.42 0.5
291,278 + 10188 mRNA_1820 0.43 0.5
291,281 - 10188 mRNA_1820 0.43 2.7
291,283 + 10188 mRNA_1820 0.43 0.8
291,283 - 10188 mRNA_1820 0.43 -0.1
291,289 + 10188 mRNA_1820 0.44 0.1
291,289 + 10188 mRNA_1820 0.44 -1.0
291,290 - 10188 mRNA_1820 0.44 -1.5
291,297 + 10188 mRNA_1820 0.45 -1.2
291,299 + 10188 mRNA_1820 0.46 -0.1
291,300 - 10188 mRNA_1820 0.46 0.6
291,317 - 10188 mRNA_1820 0.48 1.3
291,349 + 10188 mRNA_1820 0.53 0.2
291,352 - 10188 mRNA_1820 0.53 0.6
291,358 - 10188 mRNA_1820 0.54 0.2
291,370 + 10188 mRNA_1820 0.56 0.2
291,371 + 10188 mRNA_1820 0.56 1.1
291,416 - 10188 mRNA_1820 0.62 0.1
291,416 + 10188 mRNA_1820 0.62 0.8
291,437 + 10188 mRNA_1820 0.65 0.5
291,438 + 10188 mRNA_1820 0.65 0.4
291,520 + 10188 mRNA_1820 0.77 1.1
291,552 - 10188 mRNA_1820 0.82 -0.1
291,557 - 10188 mRNA_1820 0.82 -0.0
291,581 + 10188 mRNA_1820 0.86 0.7
291,582 - 10188 mRNA_1820 0.86 -0.0
291,587 + 10188 mRNA_1820 0.86 -0.1
291,596 + 10188 mRNA_1820 0.88 0.6
291,601 + 10188 mRNA_1820 0.88 0.5
291,620 - -0.1
291,762 - 0.6
291,781 - 0.2
291,799 - 0.4
291,933 - -0.1
291,962 - 10189 mRNA_1821 0.10 -0.3
292,036 - 10189 mRNA_1821 0.13 0.2
292,042 - 10189 mRNA_1821 0.14 -0.1
292,049 + 10189 mRNA_1821 0.14 0.7
292,064 - 10189 mRNA_1821 0.15 2.0
292,222 - 10189 mRNA_1821 0.21 1.3
292,240 + 10189 mRNA_1821 0.22 1.1
292,380 - 10189 mRNA_1821 0.28 0.4
292,403 - 10189 mRNA_1821 0.29 0.0
292,501 - 10189 mRNA_1821 0.33 1.0
293,253 - 10189 mRNA_1821 0.64 0.0
293,542 + 10189 mRNA_1821 0.76 0.7
293,793 + 10189 mRNA_1821 0.87 0.2
293,854 - 10189 mRNA_1821 0.89 -0.4
293,983 - 0.0
294,137 - -0.4
294,190 - -0.3
294,407 - 0.7
294,410 + 0.4
294,451 + -0.4
294,562 - -0.9
295,045 - 10190 mRNA_1822 0.14 0.7