Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1792

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1790: 10158 - Hypothetical Protein, at 212184 to 213881 10158 mRNA_1791: 10159 - Hypothetical Protein, at 214130 to 214450 10159 mRNA_1792: 10160 - Hypothetical Protein, at 214724 to 215217 10160 mRNA_1793: 10161 - K02867 RP-L11, MRPL11, rplK large subunit ribosomal protein L11, at 215281 to 215917 10161 mRNA_1794: 10162 - BLAST peroxisomal membrane anchor protein [Aspergillus ..., at 216016 to 217175 10162

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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214,016 - 0.4
214,019 + 0.7
214,162 - 10159 mRNA_1791 0.10 0.5
214,184 + 10159 mRNA_1791 0.17 1.0
214,190 - 10159 mRNA_1791 0.19 0.6
214,319 - 10159 mRNA_1791 0.59 1.4
214,323 - 10159 mRNA_1791 0.60 0.3
214,328 - 10159 mRNA_1791 0.62 -0.6
214,335 - 10159 mRNA_1791 0.64 -0.8
214,336 - 10159 mRNA_1791 0.64 1.7
214,336 - 10159 mRNA_1791 0.64 0.5
214,337 + 10159 mRNA_1791 0.64 -0.2
214,347 + 10159 mRNA_1791 0.68 0.1
214,349 - 10159 mRNA_1791 0.68 0.5
214,357 + 10159 mRNA_1791 0.71 -0.4
214,367 + 10159 mRNA_1791 0.74 0.0
214,384 - 10159 mRNA_1791 0.79 -1.3
214,461 - 1.0
214,467 + 0.6
214,473 - 0.3
214,484 - 0.1
214,485 + 2.8
214,486 + 0.5
214,520 - 0.6
214,549 - 0.1
214,628 - 0.2
214,772 - 0.4
214,786 - 10160 mRNA_1792 0.13 0.3
214,925 - 10160 mRNA_1792 0.41 -0.1
215,096 - 10160 mRNA_1792 0.75 0.5
215,096 - 10160 mRNA_1792 0.75 0.9
215,107 - 10160 mRNA_1792 0.78 0.5
215,220 + 1.2
216,013 - 0.4
216,102 + 1.0
216,117 - 0.4
216,117 + 0.4