Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1702

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1701: 10069 - K03522 fixB, etfA electron transfer flavoprotein alpha subunit, at 928577 to 930398 10069 mRNA_1702: 10070 - Hypothetical Protein, at 930827 to 931156 10070

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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930,270 + 3.0
930,285 - -0.0
930,422 + 0.7
930,424 - 0.7
930,429 + 1.0
930,452 + -0.4
930,453 + 0.3
930,454 - 0.9
930,558 + 1.2
930,578 + 0.6
930,582 - 1.1
930,587 + 0.3
930,890 - 10070 mRNA_1702 0.19 0.0
931,021 + 10070 mRNA_1702 0.59 2.2
931,167 + 0.7
931,192 + 0.1
931,330 + 0.1
931,475 + 0.1
931,491 + 1.3
931,536 + 0.5
931,628 + -0.6
931,645 - -0.3
931,653 + 0.6
931,660 + 0.7
931,700 + 1.7
931,727 + 1.4
931,734 - 1.2
931,740 - -0.2
931,747 + 0.0
931,750 - 0.8
931,758 + 0.9
931,765 - 0.7
931,797 - 0.3
931,895 - 0.5
931,897 - 0.3
931,903 + -0.9
931,913 - 0.5
931,925 + -0.0
932,045 + 0.1
932,046 - 0.4
932,046 - 1.4
932,066 - 0.2
932,072 + -0.4
932,075 - 0.6