Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1696

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1695: 10063 - BLAST cyclin-like F-box domain containing protein [Rhod..., at 916247 to 917394 10063 mRNA_1696: 10064 - BLAST membrane-associating domain protein [Rhizoctonia sola..., at 917668 to 919209 10064 mRNA_1697: 10065 - BLAST Pro41 protein, putative [Rhizoctonia solani AG-3 Rhs1AP], at 919612 to 920343 10065

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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916,691 - 10063 mRNA_1695 0.39 -0.2
916,692 + 10063 mRNA_1695 0.39 -0.1
916,901 + 10063 mRNA_1695 0.57 0.0
916,979 + 10063 mRNA_1695 0.64 -0.6
917,309 - 0.2
917,316 + 0.6
917,592 - -0.0
917,682 - -0.2
917,725 - -0.3
918,024 + 10064 mRNA_1696 0.23 -0.1
918,129 + 10064 mRNA_1696 0.30 0.2
918,218 - 10064 mRNA_1696 0.36 0.7
918,324 - 10064 mRNA_1696 0.43 1.1
918,783 + 10064 mRNA_1696 0.72 -0.0
918,954 + 10064 mRNA_1696 0.83 -0.3
918,954 + 10064 mRNA_1696 0.83 1.3
919,066 + 0.0
919,203 - 1.0
919,222 + 0.3
919,227 - 1.1
919,291 - 0.7
919,292 + 0.1
919,292 + 1.0
919,499 - 0.7
919,696 - 10065 mRNA_1697 0.11 -0.4
919,799 + 10065 mRNA_1697 0.26 0.5
919,996 + 10065 mRNA_1697 0.52 2.0
920,132 - 10065 mRNA_1697 0.71 0.2
920,155 + 10065 mRNA_1697 0.74 0.8