Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1675

Experiments: 40 hrs Median Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1674: 10042 - K07297 ADIPOR adiponectin receptor, at 860201 to 862501 10042 mRNA_1675: 10043 - K01424 E3.5.1.1, ansA, ansB L-asparaginase, at 863051 to 864755 10043 mRNA_1676: 10044 - SUPERFAMILY--SSF81383, at 865613 to 866688 10044

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Median Buoyancy
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862,207 - 10042 mRNA_1674 0.87 0.7
862,338 + 0.3
862,472 + 0.5
862,603 + 1.2
862,633 + 0.1
862,669 - -0.5
862,773 + -0.4
862,794 + 0.0
862,821 - 0.8
863,083 - 0.5
863,360 - 10043 mRNA_1675 0.18 0.6
863,467 - 10043 mRNA_1675 0.24 1.2
863,480 + 10043 mRNA_1675 0.25 0.8
864,094 - 10043 mRNA_1675 0.61 0.4
864,123 + 10043 mRNA_1675 0.63 0.1
864,221 + 10043 mRNA_1675 0.69 0.4
864,387 - 10043 mRNA_1675 0.78 0.1
864,544 + 10043 mRNA_1675 0.88 -1.3
864,550 - 10043 mRNA_1675 0.88 -0.7
864,812 - 0.3
865,105 - 1.3
865,106 - 1.5
865,123 + 0.8
865,386 + 0.3
865,423 - 0.1
865,462 + 0.1
865,695 - 0.5