Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1629

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1628: 9996 - Hypothetical Protein, at 753218 to 753980 9996 mRNA_1629: 9997 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 754772 to 756288 9997 mRNA_1630: 9998 - SUPERFAMILY--SSF81383, at 756759 to 757602 9998

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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753,819 - 9996 mRNA_1628 0.79 -0.0
754,233 + -0.3
754,535 + 0.6
754,686 + -0.3
754,686 - -0.2
755,007 + 9997 mRNA_1629 0.15 0.1
755,409 - 9997 mRNA_1629 0.42 0.4
755,410 + 9997 mRNA_1629 0.42 -0.3
755,420 + 9997 mRNA_1629 0.43 -0.3
755,699 + 9997 mRNA_1629 0.61 0.3
755,852 - 9997 mRNA_1629 0.71 -0.6
755,863 + 9997 mRNA_1629 0.72 0.0
756,390 + -0.5
756,568 - -0.1
756,573 + -0.7
756,985 - 9998 mRNA_1630 0.27 0.6
757,006 - 9998 mRNA_1630 0.29 1.2
757,018 - 9998 mRNA_1630 0.31 -0.3
757,266 + 9998 mRNA_1630 0.60 1.2