Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1613

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1612: 9980 - Hypothetical Protein, at 717528 to 719368 9980 mRNA_1613: 9981 - K01228 GCS1 mannosyl-oligosaccharide glucosidase, at 719549 to 722839 9981 mRNA_1614: 9982 - KOG2819 Uncharacterized conserved protein, at 722930 to 724798 9982

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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718,812 + 9980 mRNA_1612 0.70 -0.4
718,897 + 9980 mRNA_1612 0.74 1.2
719,049 + 9980 mRNA_1612 0.83 0.5
719,052 - 9980 mRNA_1612 0.83 0.3
719,073 + 9980 mRNA_1612 0.84 0.2
719,100 + 9980 mRNA_1612 0.85 0.8
719,203 + 0.0
719,507 + 1.0
719,581 - -0.4
720,237 - 9981 mRNA_1613 0.21 0.5
720,412 + 9981 mRNA_1613 0.26 1.3
720,516 + 9981 mRNA_1613 0.29 0.9
720,530 - 9981 mRNA_1613 0.30 -0.8
720,665 - 9981 mRNA_1613 0.34 0.0
720,964 + 9981 mRNA_1613 0.43 0.3
721,296 + 9981 mRNA_1613 0.53 0.3
721,551 - 9981 mRNA_1613 0.61 0.9
721,853 - 9981 mRNA_1613 0.70 -0.0
722,132 - 9981 mRNA_1613 0.78 0.2
722,273 - 9981 mRNA_1613 0.83 0.1
722,605 - 0.3
722,743 + 1.7
722,884 + 1.3
723,005 - -0.4
723,025 + -0.4
723,030 - 0.0
723,033 + 1.2
723,127 + 9982 mRNA_1614 0.11 0.7
723,176 - 9982 mRNA_1614 0.13 0.7