Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1605

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1604: 9972 - K02209 MCM5, CDC46 DNA replication licensing factor MCM5, at 700738 to 703638 9972 mRNA_1605: 9973 - Hypothetical Protein, at 703733 to 704608 9973 mRNA_1606: 9974 - Hypothetical Protein, at 705021 to 705665 9974

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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703,692 - 0.4
703,707 - -0.2
703,708 - 1.5
703,716 - -0.2
703,738 + -0.2
703,754 + 1.0
703,854 - 9973 mRNA_1605 0.14 0.7
703,875 + 9973 mRNA_1605 0.16 -0.1
704,175 - 9973 mRNA_1605 0.50 0.2
704,288 + 9973 mRNA_1605 0.63 0.8
704,464 - 9973 mRNA_1605 0.83 1.0
704,584 - -1.4
704,592 + 0.2
704,920 + -0.3
704,924 + -0.3
704,948 - -0.2
705,219 - 9974 mRNA_1606 0.31 -1.7
705,342 + 9974 mRNA_1606 0.50 0.5