Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1596

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1595: 9963 - K13342 PEX5, PXR1 peroxin-5, at 683358 to 685744 9963 mRNA_1596: 9964 - K14557 UTP6 U3 small nucleolar RNA-associated protein 6, at 686125 to 688577 9964 mRNA_1597: 9965 - Hypothetical Protein, at 688667 to 689443 9965

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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685,661 + -1.7
685,782 + 1.2
685,796 + -0.1
685,821 - -0.4
685,917 + 0.4
685,922 - -0.8
685,922 - 0.8
685,943 + 0.1
685,954 + 1.3
685,956 - 0.9
685,956 + -2.6
686,111 - -1.7
686,450 + 9964 mRNA_1596 0.13 -1.0
688,604 + 0.5
689,344 + 9965 mRNA_1597 0.87 -0.4
689,416 + 0.1
689,508 + 0.9
689,522 + 0.6
689,565 + 0.6