Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1579

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1579: 9947 - Hypothetical Protein, at 648385 to 649747 9947 mRNA_1580: 9948 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 650033 to 651263 9948

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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647,480 - -0.2
647,516 + 2.6
647,604 - -0.7
647,793 + -1.1
647,900 + 0.3
649,191 - 9947 mRNA_1579 0.59 -0.4
649,338 - 9947 mRNA_1579 0.70 -1.2
649,357 - 9947 mRNA_1579 0.71 -0.1
649,506 + 9947 mRNA_1579 0.82 0.8
649,511 - 9947 mRNA_1579 0.83 0.0
649,638 - -0.4
649,646 + -0.3
649,658 - 0.4
649,768 - 1.9
649,778 + 2.2
649,805 - -0.3
649,810 - -0.0
649,810 - -0.7
649,932 + 1.5
649,960 - -0.3
649,966 - -0.3
649,967 + -0.2
649,968 - 0.2
649,969 + 0.7
649,972 - 1.7
649,975 - 0.8
650,000 + -0.2
650,010 + 0.1
650,273 - 9948 mRNA_1580 0.19 -1.0
650,298 - 9948 mRNA_1580 0.22 -0.1
650,303 + 9948 mRNA_1580 0.22 0.2
650,423 + 9948 mRNA_1580 0.32 0.2
650,574 - 9948 mRNA_1580 0.44 -0.4
650,584 - 9948 mRNA_1580 0.45 -1.6
650,683 + 9948 mRNA_1580 0.53 -0.0