Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1523

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1522: 9890 - K06685 MOB1, Mats MOB kinase activator 1, at 502826 to 504110 9890 mRNA_1523: 9891 - Hypothetical Protein, at 504257 to 504927 9891 mRNA_1524: 9892 - K07178 RIOK1 RIO kinase 1, at 505162 to 507225 9892

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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503,455 - 9890 mRNA_1522 0.49 1.0
503,475 + 9890 mRNA_1522 0.51 1.4
503,478 - 9890 mRNA_1522 0.51 0.7
503,488 + 9890 mRNA_1522 0.52 1.1
503,611 + 9890 mRNA_1522 0.61 -0.6
503,886 - 9890 mRNA_1522 0.82 -0.2
504,058 + -0.1
504,075 - -0.1
504,212 + 0.2
504,353 - 9891 mRNA_1523 0.14 0.1
504,362 - 9891 mRNA_1523 0.16 -1.2
504,363 + 9891 mRNA_1523 0.16 -1.5
504,367 - 9891 mRNA_1523 0.16 -1.9
504,367 + 9891 mRNA_1523 0.16 0.4
504,522 + 9891 mRNA_1523 0.39 -0.2
504,806 - 9891 mRNA_1523 0.82 -0.1
504,826 + 9891 mRNA_1523 0.85 0.1
505,105 + -0.8
505,107 + -0.0
505,127 - -0.9
505,128 + -0.4
505,128 + 0.2
505,140 - -0.5
505,150 - 0.3