Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1519

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1518: 9886 - K03521 fixA, etfB electron transfer flavoprotein beta subunit, at 496923 to 498027 9886 mRNA_1519: 9887 - K03434 PIGL N-acetylglucosaminylphosphatidylinositol deacetylase, at 498486 to 499593 9887 mRNA_1520: 9888 - K00765 hisG ATP phosphoribosyltransferase, at 499910 to 501221 9888

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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498,174 - -1.1
498,175 - 0.6
498,180 - -0.2
498,181 - -0.0
498,320 + -0.1
498,322 - -0.2
498,334 - 1.4
498,338 - 0.2
498,339 - 1.8
498,340 + 0.5
498,343 + 1.8
498,658 + 9887 mRNA_1519 0.16 0.3
498,737 - 9887 mRNA_1519 0.23 0.7
498,737 - 9887 mRNA_1519 0.23 0.4
499,643 + 0.1
499,653 + 0.3
499,673 + -0.3
499,673 + 0.1
499,790 + -0.0
499,791 + -0.2
499,794 - -0.6