Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1448

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1448: 9816 - KOG4159 Predicted E3 ubiquitin ligase, at 313855 to 315152 9816 mRNA_1449: 9817 - K03325 TC.ACR3 arsenite transporter, ACR3 family, at 315530 to 317378 9817

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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312,876 - 0.2
312,920 - 0.9
312,940 + 0.3
313,228 - 0.3
313,390 - -0.4
313,759 - -0.5
313,803 + 0.1
314,075 + 9816 mRNA_1448 0.17 0.3
314,129 + 9816 mRNA_1448 0.21 -0.1
314,315 - 9816 mRNA_1448 0.35 -0.4
314,325 + 9816 mRNA_1448 0.36 0.6
314,952 + 9816 mRNA_1448 0.85 -1.2
315,290 - 0.5
315,340 + 1.2
315,402 + -0.0
315,641 - 1.8
316,077 - 9817 mRNA_1449 0.30 0.0
316,091 + 9817 mRNA_1449 0.30 0.4
316,099 + 9817 mRNA_1449 0.31 -1.7