Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1434

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1433: 9801 - K17081 PHB2 prohibitin 2, at 269247 to 270588 9801 mRNA_1434: 9802 - Hypothetical Protein, at 270891 to 274299 9802 mRNA_1435: 9803 - Hypothetical Protein, at 274509 to 275627 9803

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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269,894 - 9801 mRNA_1433 0.48 -0.7
270,162 - 9801 mRNA_1433 0.68 -0.9
270,328 + 9801 mRNA_1433 0.81 -2.2
270,330 - 9801 mRNA_1433 0.81 -0.7
270,333 + 9801 mRNA_1433 0.81 -0.1
270,390 + 9801 mRNA_1433 0.85 0.6
270,484 + -0.3
270,497 + -0.4
270,644 + -0.3
270,650 - 0.9
270,774 - -0.1
270,778 + 0.8
270,927 + -0.8
270,930 + -0.4
270,930 + 1.0
271,071 - 0.3
271,090 - -0.1
271,227 - -1.2
271,994 - 9802 mRNA_1434 0.32 -1.8
272,264 + 9802 mRNA_1434 0.40 0.4
272,379 - 9802 mRNA_1434 0.44 0.8
272,538 - 9802 mRNA_1434 0.48 0.5
272,543 + 9802 mRNA_1434 0.48 -0.0
272,796 + 9802 mRNA_1434 0.56 0.0
272,829 - 9802 mRNA_1434 0.57 -0.3
273,017 - 9802 mRNA_1434 0.62 -0.2
273,252 - 9802 mRNA_1434 0.69 1.6
273,860 - 9802 mRNA_1434 0.87 -0.2
274,360 + -0.1
274,903 - 9803 mRNA_1435 0.35 0.8
275,258 + 9803 mRNA_1435 0.67 -2.4