Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1389

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1389: 9757 - Hypothetical Protein, at 155335 to 156152 9757 mRNA_1390: 9758 - KOG0988 RNA-directed RNA polymerase QDE-1 required for posttranscriptional gene silencing and RNA interference, at 156559 to 159898 9758

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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154,755 - 0.3
154,788 + 1.0
154,918 - -0.0
155,056 + -0.4
155,060 + 0.3
155,069 - 0.1
155,091 - 1.5
155,127 + 0.1
155,216 + 0.1
155,226 + 0.8
155,231 - -0.5
155,239 + -0.2
155,249 + 1.7
155,349 + 0.7
155,354 - 0.1
155,365 - 1.3
155,366 - -0.3
155,380 + 0.1
155,389 + 1.1
155,391 - -0.9
155,392 - -0.5
155,394 - 0.2
155,404 + -0.5
155,502 + 9757 mRNA_1389 0.20 -0.0
155,503 - 9757 mRNA_1389 0.21 0.4
155,527 - 9757 mRNA_1389 0.23 -0.5
155,533 - 9757 mRNA_1389 0.24 -0.6
155,544 - 9757 mRNA_1389 0.26 0.5
155,576 + 9757 mRNA_1389 0.29 -0.9
155,663 + 9757 mRNA_1389 0.40 -0.3
155,667 - 9757 mRNA_1389 0.41 1.1
155,678 + 9757 mRNA_1389 0.42 -1.0
155,679 - 9757 mRNA_1389 0.42 0.8
155,685 + 9757 mRNA_1389 0.43 0.3
155,687 - 9757 mRNA_1389 0.43 -2.1
155,690 - 9757 mRNA_1389 0.43 0.1
155,696 - 9757 mRNA_1389 0.44 -0.0
155,715 - 9757 mRNA_1389 0.46 -0.3
155,749 + 9757 mRNA_1389 0.51 -0.3
155,764 + 9757 mRNA_1389 0.52 -0.1
155,816 + 9757 mRNA_1389 0.59 0.9
155,834 - 9757 mRNA_1389 0.61 -0.0
155,853 + 9757 mRNA_1389 0.63 -0.5
155,859 - 9757 mRNA_1389 0.64 -1.6
155,861 - 9757 mRNA_1389 0.64 -0.3
155,861 + 9757 mRNA_1389 0.64 -0.3
155,861 - 9757 mRNA_1389 0.64 -1.0
155,861 + 9757 mRNA_1389 0.64 0.4
155,866 - 9757 mRNA_1389 0.65 -0.2
155,872 + 9757 mRNA_1389 0.66 -1.3
155,876 + 9757 mRNA_1389 0.66 0.5
155,878 + 9757 mRNA_1389 0.66 0.9
155,887 + 9757 mRNA_1389 0.67 -0.9
155,998 - 9757 mRNA_1389 0.81 0.5
156,021 + 9757 mRNA_1389 0.84 0.0
156,156 + 0.2
156,157 - -0.4
156,173 + -0.7
156,723 - 1.7
156,876 - 0.0
156,887 + -0.0
156,905 + 9758 mRNA_1390 0.10 1.2