Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1372

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1371: 9739 - KOG3024 Uncharacterized conserved protein, at 114058 to 115447 9739 mRNA_1372: 9740 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 115782 to 116339 9740 mRNA_1373: 9741 - K05661 ABCB6 ATP-binding cassette, subfamily B (MDR/TAP), member 6, at 116754 to 120065 9741

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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115,527 - -0.2
115,843 - 9740 mRNA_1372 0.11 1.0
116,036 + 9740 mRNA_1372 0.46 -0.4
116,187 + 9740 mRNA_1372 0.73 -0.3
116,267 + 9740 mRNA_1372 0.87 -0.8
116,419 - -0.2
116,420 + -0.6
116,576 + -0.1
116,604 - 0.7
116,731 + -0.5
116,876 - -2.0
117,019 - -0.1
117,055 - -0.4
117,188 + 9741 mRNA_1373 0.13 0.3
117,208 + 9741 mRNA_1373 0.14 -0.4