Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1363

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1363: 9731 - K11147 DHRS4 dehydrogenase/reductase SDR family member 4, at 98069 to 99768 9731 mRNA_1364: 9732 - SUPERFAMILY--SSF48452, at 100548 to 102445 9732

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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97,398 - 0.4
97,433 + 0.2
97,563 + -0.8
97,720 + 0.9
97,730 - -1.5
97,840 - -1.3
97,848 + 0.1
97,849 - 1.5
97,854 - -0.5
97,859 + 0.4
97,860 - -1.0
97,873 - 0.2
97,873 + -0.1
97,876 - -0.8
97,877 + -0.5
97,884 + -0.7
97,886 + 0.8
97,888 + 0.4
97,996 - 1.1
98,001 + 0.3
98,002 - -1.1
98,002 + 0.4
98,005 + -0.1
98,006 - 0.4
98,007 + -0.9
98,008 + -0.8
98,166 + -1.0
98,325 + 9731 mRNA_1363 0.15 -1.1
98,349 - 9731 mRNA_1363 0.16 0.0
98,460 + 9731 mRNA_1363 0.23 0.1
98,492 + 9731 mRNA_1363 0.25 0.0
98,623 - 9731 mRNA_1363 0.33 -1.5
98,706 + 9731 mRNA_1363 0.37 2.0
98,761 - 9731 mRNA_1363 0.41 0.9
98,915 + 9731 mRNA_1363 0.50 -0.9
99,047 - 9731 mRNA_1363 0.58 -0.5
99,303 + 9731 mRNA_1363 0.73 -1.0
99,605 + -0.2
99,769 - -0.2
99,905 - -0.8
99,910 + -0.7
99,921 + -0.1
99,927 + 0.4
99,929 + 0.4
99,956 - 1.1
100,052 + -0.6
100,211 - 0.4
100,243 - -0.4
100,386 + -0.1