Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1324

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1323: 9691 - Hypothetical Protein, at 929685 to 931310 9691 mRNA_1324: 9692 - Hypothetical Protein, at 931837 to 933855 9692

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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930,867 - 9691 mRNA_1323 0.73 -0.1
930,909 - 9691 mRNA_1323 0.75 -0.9
930,911 - 9691 mRNA_1323 0.75 0.1
931,056 - 9691 mRNA_1323 0.84 0.5
931,105 + 9691 mRNA_1323 0.87 0.3
931,196 - 1.8
931,535 + -0.4
931,627 - 0.1
931,629 + 1.1
931,682 + 0.9
931,708 + 0.2
931,801 + 1.3
931,929 - -0.9
931,935 + -0.4
931,942 - 0.7
932,059 + 9692 mRNA_1324 0.11 -1.4
932,348 - 9692 mRNA_1324 0.25 -0.7
932,355 + 9692 mRNA_1324 0.26 0.6
932,441 + 9692 mRNA_1324 0.30 0.5
932,441 - 9692 mRNA_1324 0.30 0.9
932,484 - 9692 mRNA_1324 0.32 0.5
932,489 - 9692 mRNA_1324 0.32 -0.2
932,526 - 9692 mRNA_1324 0.34 0.6
932,871 + 9692 mRNA_1324 0.51 -0.4
933,005 + 9692 mRNA_1324 0.58 -0.0
933,025 - 9692 mRNA_1324 0.59 -0.8
933,070 + 9692 mRNA_1324 0.61 -0.1
933,248 - 9692 mRNA_1324 0.70 -0.0
933,344 + 9692 mRNA_1324 0.75 -1.9
933,396 + 9692 mRNA_1324 0.77 -0.0
933,530 - 9692 mRNA_1324 0.84 0.3
933,554 + 9692 mRNA_1324 0.85 -0.6
933,843 + -0.8
933,877 - 0.3
933,911 + -0.3
933,927 + -0.0
933,938 - 0.2
933,942 - 1.7
933,984 + 0.4
933,990 - -0.5
934,003 - -0.1
934,284 + -1.1
934,292 - -0.1
934,322 + -0.4
934,378 - 0.5
934,416 - 0.0
934,417 + -0.4
934,701 + -0.3
934,734 + 0.9
934,811 - -1.2