Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1314

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1313: 9681 - K18586 COQ4 ubiquinone biosynthesis protein COQ4, at 899642 to 900633 9681 mRNA_1314: 9682 - BLAST carboxymethylenebutenolidase [Rhizoctonia solani AG-1..., at 900710 to 903135 9682 mRNA_1315: 9683 - K12813 DHX16 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, at 903446 to 907323 9683

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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900,593 - -0.1
900,862 - 0.4
900,880 + -0.2
900,887 + -0.3
901,483 + 9682 mRNA_1314 0.32 -1.1
901,486 - 9682 mRNA_1314 0.32 -1.2
902,471 + 9682 mRNA_1314 0.73 3.4
902,782 + 9682 mRNA_1314 0.85 0.0
902,902 + 0.8
903,185 + 0.4
903,194 - -1.9