Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1301

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1300: 9668 - BLAST polynucleotide 5-hydroxyl-kinase grc3 [Xanthophyllomy..., at 862697 to 864122 9668 mRNA_1301: 9669 - K06947 GRC3, NOL9 polynucleotide 5'-hydroxyl-kinase GRC3/NOL9, at 864928 to 866257 9669 mRNA_1302: 9670 - Hypothetical Protein, at 866554 to 866811 9670

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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865,421 - 9669 mRNA_1301 0.37 0.4
865,499 - 9669 mRNA_1301 0.43 1.7
866,339 + -1.1
866,340 - 0.1
866,364 + -1.5
866,395 + -0.7
866,457 + 0.3
866,657 - 9670 mRNA_1302 0.40 0.1
866,701 - 9670 mRNA_1302 0.57 -0.0
866,794 + -0.1
866,851 - -0.2
866,859 + -0.2
866,863 - 0.1
866,895 + 1.1
866,900 + -1.1
866,921 + 0.7
866,953 - 0.0
866,954 - -0.1
866,955 - 0.5
866,969 - -0.4
866,969 + 0.4
867,045 + -0.3
867,051 + -0.2
867,052 - -0.5
867,066 - 0.2
867,066 - 0.0
867,070 - -0.2
867,073 - -0.1
867,133 + 0.7
867,133 + -0.5
867,136 - -0.5
867,140 + 1.3
867,143 - 1.3
867,152 + 1.3
867,154 - -0.2
867,160 - -0.7
867,242 - 0.1