Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1243

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1242: 9610 - K01110 PTEN phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN, at 736191 to 738180 9610 mRNA_1243: 9611 - K02493 hemK, prmC, HEMK release factor glutamine methyltransferase, at 738287 to 739305 9611 mRNA_1244: 9612 - SUPERFAMILY--SSF52047, at 739687 to 741319 9612

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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737,909 + 9610 mRNA_1242 0.86 -0.2
737,973 - 9610 mRNA_1242 0.90 0.4
737,973 - 9610 mRNA_1242 0.90 -2.1
738,159 + -0.3
738,167 - -0.2
738,170 + -0.0
738,508 - 9611 mRNA_1243 0.22 -0.7
739,182 + 9611 mRNA_1243 0.88 -0.0
739,310 + -0.2
739,455 - -0.3
739,458 - 0.1
739,461 + -0.7
739,480 + -0.2
739,596 - -0.1
739,606 - 1.3
739,609 - -0.6
739,628 - 0.4
739,634 - 0.2
739,635 + 0.3
739,639 + 0.4
739,770 + -1.2
739,771 - -0.3
739,778 + -0.1
739,782 + -0.2
739,914 - 9612 mRNA_1244 0.14 -0.1
739,918 - 9612 mRNA_1244 0.14 -0.8
739,963 - 9612 mRNA_1244 0.17 -1.1