Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1202

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1202: 9570 - K11253 H3 histone H3, at 640154 to 640968 9570 mRNA_1203: 9571 - K01049 ACHE acetylcholinesterase, at 641657 to 643946 9571

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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639,300 - -0.0
639,315 - -0.4
639,322 + 1.0
639,325 + -0.5
639,731 - -0.1
639,736 - -0.4
639,737 + -0.1
639,738 + -0.4
639,740 + -0.8
639,744 + 0.3
639,746 - 0.2
639,749 - 0.6
639,754 - 0.5
639,759 - -0.6
639,761 - -0.1
639,763 + 0.3
639,764 + -0.0
639,765 + -0.4
639,766 + 0.3
639,766 - 0.2
639,767 - -0.3
639,769 - -1.3
639,771 - -1.1
639,780 - -0.3
639,781 + -0.8
639,781 + -0.4
639,783 + 0.3
639,790 - -0.8
639,810 + 0.5
639,817 - 0.1
639,852 - 0.2
639,854 - 0.1
639,876 - 0.5
639,876 - -0.1
640,019 - 1.0
640,033 - 0.1
640,280 + 9570 mRNA_1202 0.15 -0.5
640,325 + 9570 mRNA_1202 0.21 0.9
640,465 + 9570 mRNA_1202 0.38 -0.7
640,469 + 9570 mRNA_1202 0.39 -2.2
641,169 + -0.3
641,177 - -0.2
641,207 - -2.3
641,310 - 0.9
641,318 - -0.9
641,322 - 0.2
641,350 + 0.9
641,365 + -0.2
641,370 + 1.0
641,392 + -0.1
641,395 + 0.9
641,408 - 2.5
641,414 - 1.2
641,417 - 0.0
641,422 + -0.3
641,429 + 0.7
641,485 + -0.5
641,491 + -0.5
641,493 - 1.4
641,494 + 0.4
641,510 + 0.5
641,527 + -0.1
641,528 + 0.7
641,544 + -0.4
641,562 - 0.3
641,594 + -0.2
641,614 - 0.9
641,628 - 0.6
641,667 - -0.1
641,849 + -1.3
641,921 + 9571 mRNA_1203 0.12 -0.4
641,948 + 9571 mRNA_1203 0.13 0.2
641,957 + 9571 mRNA_1203 0.13 -0.5