Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1163

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1162: 9530 - SUPERFAMILY--SSF52047, at 547799 to 548923 9530 mRNA_1163: 9531 - KOG1378 Purple acid phosphatase, at 549366 to 551873 9531 mRNA_1164: 9532 - Hypothetical Protein, at 552710 to 552960 9532

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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548,640 - 9530 mRNA_1162 0.75 -0.3
548,649 + 9530 mRNA_1162 0.76 0.9
548,931 + 0.7
548,953 - 0.4
548,960 + -0.0
548,977 + -1.2
549,107 - -1.0
549,116 - 1.2
549,130 + 0.6
549,132 + 1.2
549,245 + 0.2
549,273 + -0.3
549,276 - 0.1
549,295 + -0.9
549,445 + -0.2
549,548 + -0.4
549,581 - 0.3
549,737 + 9531 mRNA_1163 0.15 0.1
549,737 + 9531 mRNA_1163 0.15 0.2
549,855 + 9531 mRNA_1163 0.19 0.3
550,058 + 9531 mRNA_1163 0.28 -0.3
550,306 - 9531 mRNA_1163 0.37 -0.2
550,322 - 9531 mRNA_1163 0.38 -0.1
550,331 - 9531 mRNA_1163 0.38 -0.6
550,467 + 9531 mRNA_1163 0.44 0.4
550,472 + 9531 mRNA_1163 0.44 0.2
550,776 + 9531 mRNA_1163 0.56 1.0
551,075 - 9531 mRNA_1163 0.68 0.1
551,354 - 9531 mRNA_1163 0.79 1.4
551,802 - 0.1
551,900 - -1.6
552,323 + -0.1
552,338 - 0.2
552,354 + -0.9
552,650 + 0.1
552,697 - 0.1
552,701 + 0.3
552,761 + 9532 mRNA_1164 0.20 0.3
552,777 - 9532 mRNA_1164 0.27 0.2
552,788 - 9532 mRNA_1164 0.31 1.0
552,789 - 9532 mRNA_1164 0.31 -0.1
552,824 + 9532 mRNA_1164 0.45 0.7
552,848 - 9532 mRNA_1164 0.55 0.8
552,853 + 9532 mRNA_1164 0.57 -0.3