Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1095

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1094: 9462 - HMMPfam-Frag1/DRAM/Sfk1 family-PF10277, at 393718 to 395326 9462 mRNA_1095: 9463 - KOG2741 Dimeric dihydrodiol dehydrogenase, at 395816 to 397150 9463 mRNA_1096: 9464 - KOG1611 Predicted short chain-type dehydrogenase, at 397231 to 398090 9464

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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395,065 + 9462 mRNA_1094 0.84 0.1
395,211 - -0.2
395,247 + 1.4
395,314 - 0.3
395,344 + -0.2
395,473 + 0.4
395,657 - -0.1
395,815 - -1.1
395,823 + -0.7
396,101 + 9463 mRNA_1095 0.21 0.3
396,114 + 9463 mRNA_1095 0.22 -1.2
396,539 - 9463 mRNA_1095 0.54 3.1
396,955 - 9463 mRNA_1095 0.85 0.7
397,100 + -0.8
397,134 - 1.1
397,290 + 0.6
397,510 - 9464 mRNA_1096 0.32 1.1
397,788 + 9464 mRNA_1096 0.65 1.8
397,992 + 9464 mRNA_1096 0.88 -1.0