Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1072

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1071: 9439 - K18757 LARP1 la-related protein 1, at 337866 to 340861 9439 mRNA_1072: 9440 - Hypothetical Protein, at 341677 to 343060 9440 mRNA_1073: 9441 - Hypothetical Protein, at 343845 to 345302 9441

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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341,075 + -0.1
341,085 + -0.3
341,105 + -0.1
341,343 - 0.0
341,375 - 0.6
341,665 - -1.2
341,920 - 9440 mRNA_1072 0.18 0.6
342,176 + 9440 mRNA_1072 0.36 0.3
342,507 + 9440 mRNA_1072 0.60 -1.0
342,605 + 9440 mRNA_1072 0.67 1.1
342,676 - 9440 mRNA_1072 0.72 -2.0
342,821 + 9440 mRNA_1072 0.83 0.7
342,897 - 9440 mRNA_1072 0.88 -0.4
342,924 - -0.2
342,941 - 0.9
343,054 - 0.1
343,085 - -0.5
343,097 - -0.4
343,117 + -0.1
343,120 - 0.4
343,145 + -1.8
343,226 - 1.0
343,243 - -0.5
343,244 - -1.0
343,245 - 0.3
343,253 + 0.8
343,261 - 0.6
343,264 + -0.4
343,273 + 0.5
343,291 - 0.2
343,300 + 0.6
343,326 - 0.0
343,345 - 0.1
343,346 + -0.4
343,375 - -0.5
343,424 - -0.3
343,424 + -0.1
343,451 + -0.0
343,566 + -0.3
343,584 - -0.2
343,693 + -1.4
344,009 + 9441 mRNA_1073 0.11 -0.7