Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1050

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1049: 9417 - K12878 THOC1 THO complex subunit 1, at 274076 to 276723 9417 mRNA_1050: 9418 - Hypothetical Protein, at 277002 to 277499 9418 mRNA_1051: 9419 - SUPERFAMILY--SSF54928, at 277584 to 281665 9419

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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276,722 - -0.4
276,759 + -0.2
276,785 + -0.1
276,920 + 0.2
276,920 - 1.1
276,925 + -0.5
276,928 + 1.0
276,930 + -0.2
276,931 - 0.3
276,949 + -0.4
276,960 - -0.6
277,069 - 9418 mRNA_1050 0.13 -0.3
277,209 + 9418 mRNA_1050 0.42 -0.4
277,243 + 9418 mRNA_1050 0.48 0.3
277,349 - 9418 mRNA_1050 0.70 0.1
277,353 + 9418 mRNA_1050 0.70 -1.2
277,381 + 9418 mRNA_1050 0.76 -0.0
278,259 + 9419 mRNA_1051 0.17 0.3
278,286 + 9419 mRNA_1051 0.17 -0.0