Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1024

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1023: 9391 - K08272 CAB39, MO25 calcium binding protein 39, at 228517 to 230203 9391 mRNA_1024: 9392 - HMMPfam-Thaumatin family-PF00314,PIRSF--PIRSF002703,PRINTS-Pathogenesis-related protein signature-PR00347,ProSiteProfiles-Thaumatin family profile.-PS51367,SMART-Thaumatin family-SM00205,SUPERFAMILY--SSF49870, at 230632 to 231986 9392 mRNA_1025: 9393 - BLAST MIND kinetochore complex component Nnf1 [Trichophyton..., at 232781 to 233762 9393

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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230,212 - -1.2
230,354 + 0.6
230,464 - 0.4
230,495 - 0.8
230,510 - 0.7
230,890 + 9392 mRNA_1024 0.19 -0.2
230,901 + 9392 mRNA_1024 0.20 0.3
231,023 - 9392 mRNA_1024 0.29 0.6
231,044 - 9392 mRNA_1024 0.30 -0.7
231,064 + 9392 mRNA_1024 0.32 -0.7
231,445 - 9392 mRNA_1024 0.60 0.0
231,807 - 9392 mRNA_1024 0.87 0.1
231,868 + 0.2
231,910 + -0.7
232,090 - 0.1
232,144 + -1.1
232,435 - -1.0
232,447 + -0.1
232,472 - -0.2
232,474 - 0.0
232,502 - 0.1
232,616 - -0.2
232,642 + 0.9
232,779 - -1.1
232,822 + -0.3