Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_960

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_959: 9327 - Hypothetical Protein, at 73133 to 74885 9327 mRNA_960: 9328 - K20409 WDR59 WD repeat-containing protein 59, at 75504 to 80689 9328 mRNA_961: 9329 - Hypothetical Protein, at 81243 to 82808 9329

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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74,515 - 9327 mRNA_959 0.79 1.3
74,797 - 0.6
74,805 - -0.4
74,832 + 0.1
74,833 + 2.1
74,836 + 0.5
74,966 + -0.3
74,985 - 0.0
75,097 - 0.1
75,098 - 0.8
75,108 - 0.2
75,113 - 2.3
75,131 - 1.1
75,142 + 1.3
75,144 - 0.7
75,249 - 0.4
75,290 + 0.5
75,435 - 1.2
75,441 - -0.3
75,457 + -0.3
75,562 - -0.2
75,579 + -0.3
75,699 + 0.1
75,857 - -1.1
76,559 - 9328 mRNA_960 0.20 0.1
76,714 - 9328 mRNA_960 0.23 0.4
76,971 + 9328 mRNA_960 0.28 -0.6
77,154 - 9328 mRNA_960 0.32 0.1
77,175 - 9328 mRNA_960 0.32 -1.7
77,183 - 9328 mRNA_960 0.32 0.0
77,207 + 9328 mRNA_960 0.33 -0.0
78,199 - 9328 mRNA_960 0.52 -0.4
78,203 + 9328 mRNA_960 0.52 0.2
78,472 + 9328 mRNA_960 0.57 0.8
78,777 + 9328 mRNA_960 0.63 -0.4
79,148 + 9328 mRNA_960 0.70 0.9
79,205 + 9328 mRNA_960 0.71 -0.1
79,222 + 9328 mRNA_960 0.72 -0.1
79,261 + 9328 mRNA_960 0.72 0.3
79,396 + 9328 mRNA_960 0.75 0.4
79,516 + 9328 mRNA_960 0.77 -0.4
79,804 - 9328 mRNA_960 0.83 1.1
79,949 - 9328 mRNA_960 0.86 -0.2
80,116 + 9328 mRNA_960 0.89 -1.0
80,290 - -0.2
80,363 - 1.4
80,404 - 0.2
80,427 - 0.2
80,547 + -0.9
80,822 - -2.4
80,984 - 0.5
80,999 + 0.7
81,080 + 1.2