Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1 + -0.3
1 + 0.5
1 + 1.5
1 + 0.1
1 + -0.9
2 + 0.0
2 + 0.9
5 + 0.3
18 + -0.5
30 + -0.1
37 + 0.2
37 + 0.0
41 + 0.1
42 + -0.2
44 + 0.7
49 + 0.4
49 + 0.2
50 + 0.2
54 + 0.2
58 - -0.2
60 - 0.8
60 + 0.2
60 - -0.1
61 - 0.6
61 + -0.5
63 + 0.3
63 + 0.1
63 + -1.5
63 + 0.2
63 + -0.4
63 + -0.2
64 + -0.5
66 - 0.4
66 + 0.8
70 + 0.1
70 + -0.1
70 - -0.1
71 + -0.3
73 + 0.4
75 - 0.4
77 - -2.0
78 + -0.5
78 - -1.4
78 + -0.3
78 + -0.4
78 + -1.3
78 + 0.3
78 + 0.7
78 + 0.1
78 + -2.3
79 + 0.8
81 - -1.2
81 - -1.1
82 + -0.5
85 + -1.4
104 + 0.1
126 + 0.0
126 + -1.7
128 - 1.6
135 + -0.3
142 + 0.3
150 + 0.1
154 + -2.4
157 + 0.2
171 - -1.7
171 + 0.8
172 + -0.4
172 + -1.2
175 - -0.7
176 - -0.5
177 - -3.2
177 - 0.1
191 - -0.2
192 + 0.4
192 + 0.2
192 + 0.4
193 + 1.5
193 + 0.0
193 + 1.1
198 - -1.1
218 + 0.5
225 + 0.0
235 + 0.7
242 + 0.1
263 - 0.5
293 + -0.2
303 + 1.0
333 - -1.0
339 - -1.7
348 + 0.4
349 + 0.8
377 - -0.6
381 - -0.1
469 + -0.3
487 - 9298 mRNA_930 0.10 0.2
722 + 9298 mRNA_930 0.29 1.0
1,641 - 0.1
1,656 - 0.9
1,768 - -0.8
1,778 - -0.4
1,794 + 0.9