Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_840

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_839: 9207 - BLAST protein of unknown function DUF1746, fungi [Rhodo..., at 2010895 to 2011512 9207 mRNA_840: 9208 - BLAST protein of unknown function DUF1746, fungi [Rhodo..., at 2012054 to 2014320 9208 mRNA_841: 9209 - HMMPfam-Kinetochore protein CHL4 like-PF05238, at 2015079 to 2016824 9209

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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2,011,512 - 0.3
2,011,529 + 0.2
2,011,582 - -0.0
2,011,680 + -0.1
2,011,685 + 0.1
2,012,006 + -0.2
2,012,144 - 1.2
2,012,273 + -0.1
2,012,432 - 9208 mRNA_840 0.17 0.8
2,012,452 + 9208 mRNA_840 0.18 -1.8
2,014,352 - -0.2
2,014,365 - 0.6
2,014,382 - -0.1
2,014,460 + -0.6
2,014,514 - 0.2
2,014,537 - 0.2
2,014,555 + 0.1
2,014,573 - -1.7
2,014,573 + -0.7
2,014,622 + 0.2
2,014,652 + -1.2
2,014,774 + -0.8
2,014,953 + 0.3
2,014,959 - 0.1
2,014,975 + 0.2
2,015,100 + 1.4