Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_666

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_665: 9033 - K08853 AAK AP2-associated kinase, at 1602722 to 1607021 9033 mRNA_666: 9034 - ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SUPERFAMILY--SSF57701, at 1607082 to 1608088 9034 mRNA_667: 9035 - Interpro Ribosome associated membrane protein RAMP4, at 1608200 to 1608918 9035

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,606,306 + 9033 mRNA_665 0.83 0.7
1,607,148 - 0.0
1,607,636 + 9034 mRNA_666 0.55 0.3
1,607,775 - 9034 mRNA_666 0.69 -0.4
1,607,926 - 9034 mRNA_666 0.84 0.6
1,608,059 - -0.5
1,608,085 + 0.0
1,608,089 - 0.5
1,608,117 + 0.5
1,608,270 + -0.6
1,608,373 - 9035 mRNA_667 0.24 1.9
1,608,394 - 9035 mRNA_667 0.27 0.8
1,608,398 - 9035 mRNA_667 0.28 0.2
1,608,402 - 9035 mRNA_667 0.28 0.4
1,608,412 + 9035 mRNA_667 0.29 0.3
1,608,473 + 9035 mRNA_667 0.38 1.0
1,608,541 - 9035 mRNA_667 0.47 0.6
1,608,545 - 9035 mRNA_667 0.48 -0.7
1,608,557 + 9035 mRNA_667 0.50 0.8
1,608,694 - 9035 mRNA_667 0.69 1.0
1,609,010 + 0.0
1,609,051 + 2.2