Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_600

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_600: 8968 - K17785 IMMT, FCJ1, MNOS2 mitofilin, at 1443273 to 1445582 8968 mRNA_601: 8969 - K01784 galE, GALE UDP-glucose 4-epimerase, at 1446011 to 1447734 8969

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,442,414 - -0.4
1,442,548 + -0.6
1,442,548 + -0.8
1,442,554 - -0.0
1,442,660 + -0.3
1,442,814 + 0.5
1,442,818 - 0.9
1,442,819 + -0.2
1,442,955 - -0.9
1,442,988 + -1.6
1,443,083 + 0.2
1,443,091 - -0.6
1,443,105 - 0.7
1,443,122 - -0.1
1,443,136 + 0.4
1,443,136 + 1.1
1,443,138 - -0.4
1,443,152 + -0.2
1,443,420 - -1.1
1,443,432 - -0.7
1,443,570 - 8968 mRNA_600 0.13 -0.7
1,443,573 + 8968 mRNA_600 0.13 -0.6
1,443,666 + 8968 mRNA_600 0.17 -1.8
1,443,736 - 8968 mRNA_600 0.20 -0.8
1,443,977 - 8968 mRNA_600 0.30 -0.7
1,444,019 + 8968 mRNA_600 0.32 -0.4
1,444,019 - 8968 mRNA_600 0.32 -1.5
1,444,161 + 8968 mRNA_600 0.38 -0.6
1,444,283 + 8968 mRNA_600 0.44 -1.4
1,444,604 - 8968 mRNA_600 0.58 -0.4
1,444,631 + 8968 mRNA_600 0.59 -0.0
1,444,767 + 8968 mRNA_600 0.65 -1.1
1,445,058 + 8968 mRNA_600 0.77 -2.2
1,445,521 - -2.1
1,445,629 - 0.8
1,445,632 + -0.5
1,445,651 + 0.3
1,445,908 - -0.5
1,445,915 - -0.2
1,445,921 - -0.1
1,445,926 + -0.1
1,445,927 - 0.3
1,445,932 + -0.9
1,445,937 - 0.1
1,445,943 + 1.2
1,445,958 + 0.1