Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_595

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_594: 8962 - K16261 YAT yeast amino acid transporter, at 1425721 to 1428613 8962 mRNA_595: 8963 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1429134 to 1431703 8963 mRNA_596: 8964 - Hypothetical Protein, at 1432148 to 1433908 8964

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,428,151 - 8962 mRNA_594 0.84 1.8
1,428,287 - 8962 mRNA_594 0.89 0.3
1,428,446 - 0.4
1,428,758 + -0.0
1,428,847 + -0.2
1,428,864 - 0.9
1,428,887 + -0.6
1,428,895 + 0.4
1,428,919 + 0.3
1,428,926 + 0.9
1,428,935 - 0.1
1,428,936 + 0.1
1,428,940 - -0.1
1,428,940 - -0.2
1,428,954 - -1.0
1,428,956 + 0.7
1,428,957 + -0.8
1,428,969 + 0.8
1,428,972 - -1.6
1,429,007 - 0.1
1,429,097 + 0.8
1,429,101 - -0.4
1,429,235 + 0.3
1,429,394 + 8963 mRNA_595 0.10 0.4
1,429,524 - 8963 mRNA_595 0.15 0.1
1,429,539 - 8963 mRNA_595 0.16 -1.1
1,429,567 + 8963 mRNA_595 0.17 -0.1
1,429,602 + 8963 mRNA_595 0.18 1.3
1,429,707 + 8963 mRNA_595 0.22 -0.1
1,429,826 - 8963 mRNA_595 0.27 -1.0
1,430,265 + 8963 mRNA_595 0.44 0.6
1,430,284 + 8963 mRNA_595 0.45 0.2
1,430,298 - 8963 mRNA_595 0.45 -1.6
1,430,425 + 8963 mRNA_595 0.50 0.2
1,431,403 + 8963 mRNA_595 0.88 0.0
1,431,575 - -0.2
1,431,591 + -1.7
1,431,739 + -0.6
1,432,020 - 0.0
1,432,157 - -0.5
1,432,163 - -0.1
1,432,290 + 0.5
1,432,578 + 8964 mRNA_596 0.24 0.2
1,432,639 + 8964 mRNA_596 0.28 0.0