Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_547

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_546: 8914 - K00799 GST, gst glutathione S-transferase, at 1298658 to 1299726 8914 mRNA_547: 8915 - KOG2385 Uncharacterized conserved protein, at 1299978 to 1303835 8915 mRNA_548: 8916 - K15084 SLC25A16, GDA, LEU5 solute carrier family 25 (mitochondrial carrier protein), member 16, at 1304411 to 1305873 8916

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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1,299,004 - 8914 mRNA_546 0.32 -0.1
1,299,005 + 8914 mRNA_546 0.32 -0.8
1,299,125 + 8914 mRNA_546 0.44 -2.0
1,299,132 - 8914 mRNA_546 0.44 -0.2
1,299,560 + 8914 mRNA_546 0.84 0.3
1,299,683 - -0.5
1,299,691 - 0.5
1,299,858 + -1.0
1,299,859 - -0.0
1,299,873 - 0.0
1,299,873 - 0.7
1,299,877 + -0.4
1,299,896 + 1.2
1,299,912 + 0.8
1,299,912 - 0.1
1,299,918 + 0.4
1,299,942 - 0.0
1,299,949 - -0.3
1,299,949 - 1.0
1,299,950 + -0.2
1,299,951 - 0.1
1,300,068 - -0.5
1,300,241 + 0.5
1,300,358 - -0.5
1,300,527 + 8915 mRNA_547 0.14 0.2
1,302,748 - 8915 mRNA_547 0.72 -1.6
1,303,132 - 8915 mRNA_547 0.82 -0.8
1,303,820 + 0.9
1,303,862 + -0.5
1,303,950 - 1.2
1,304,010 - -0.9
1,304,021 + 1.0
1,304,021 - 0.9
1,304,151 + 1.1
1,304,156 - -0.9
1,304,291 - 0.2
1,304,536 + 0.7