Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_421

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_420: 8788 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 981514 to 982786 8788 mRNA_421: 8789 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 983035 to 984157 8789 mRNA_422: 8790 - KOG0911 Glutaredoxin-related protein, at 984573 to 985710 8790

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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982,477 - 8788 mRNA_420 0.76 0.2
982,595 - 8788 mRNA_420 0.85 1.1
982,629 + 8788 mRNA_420 0.88 -0.9
982,878 + 0.3
982,903 - 0.1
982,924 + 0.5
982,926 - -0.0
982,930 + -0.2
982,941 + -0.4
982,941 - -0.7
982,945 - 0.9
982,971 + -0.5
983,087 - -0.7
983,240 - 8789 mRNA_421 0.18 0.6
983,369 + 8789 mRNA_421 0.30 -0.1
983,645 + 8789 mRNA_421 0.54 -0.5
983,796 - 8789 mRNA_421 0.68 -1.2
983,924 - 8789 mRNA_421 0.79 0.1
984,063 - -0.8
984,096 + -0.5
984,206 - 0.1
984,485 - -0.5
984,515 + -0.1
984,647 + -0.8