Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_416

Experiments: 40 hrs Low Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_415: 8783 - K03511 POLK DNA polymerase kappa, at 969041 to 971775 8783 mRNA_416: 8784 - Hypothetical Protein, at 972046 to 973465 8784 mRNA_417: 8785 - KOG4697 Integral membrane protein involved in transport between the late Golgi and endosome, at 973590 to 974560 8785

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
remove
971,085 - 8783 mRNA_415 0.75 -0.3
971,231 + 8783 mRNA_415 0.80 -0.9
971,406 + 8783 mRNA_415 0.86 -1.0
971,520 - -0.1
971,676 - -0.4
971,794 + 0.1
971,807 - 0.2
971,959 - -0.6
971,972 - 0.5
971,990 - -0.4
972,009 + -0.6
972,230 + 8784 mRNA_416 0.13 0.2
972,248 - 8784 mRNA_416 0.14 -1.4
972,292 + 8784 mRNA_416 0.17 0.6
972,396 - 8784 mRNA_416 0.25 -0.0
972,397 + 8784 mRNA_416 0.25 0.3
972,818 + 8784 mRNA_416 0.54 0.3
972,854 + 8784 mRNA_416 0.57 1.0
973,013 + 8784 mRNA_416 0.68 0.4
973,096 - 8784 mRNA_416 0.74 -0.2
973,264 + 8784 mRNA_416 0.86 -0.1
973,447 - 0.5
973,484 - 0.2
973,582 - 1.3
973,583 - 2.0
973,704 - 8785 mRNA_417 0.12 0.3
973,721 + 8785 mRNA_417 0.13 0.2
973,722 - 8785 mRNA_417 0.14 -0.3