Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_152

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_151: 8519 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 379065 to 379994 8519 mRNA_152: 8520 - BLAST Midasin [Pteropus alecto], at 380241 to 381290 8520

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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379,268 - 8519 mRNA_151 0.22 -0.9
379,365 - 8519 mRNA_151 0.32 0.0
379,553 - 8519 mRNA_151 0.52 -0.3
379,586 + 8519 mRNA_151 0.56 -0.6
379,596 - 8519 mRNA_151 0.57 1.0
379,687 + 8519 mRNA_151 0.67 0.1
379,998 + 0.4
380,264 + 1.2
380,274 + -0.5
380,418 - 8520 mRNA_152 0.17 0.2
380,443 - 8520 mRNA_152 0.19 1.0
380,443 + 8520 mRNA_152 0.19 -0.3
380,580 + 8520 mRNA_152 0.32 -1.4
380,719 + 8520 mRNA_152 0.46 -0.1
380,728 - 8520 mRNA_152 0.46 0.4
380,732 - 8520 mRNA_152 0.47 0.3
380,735 + 8520 mRNA_152 0.47 -0.4
380,736 + 8520 mRNA_152 0.47 0.5
380,756 + 8520 mRNA_152 0.49 1.7
380,760 - 8520 mRNA_152 0.49 0.3
380,861 + 8520 mRNA_152 0.59 -0.4
380,878 + 8520 mRNA_152 0.61 0.1
380,879 + 8520 mRNA_152 0.61 0.3
380,885 - 8520 mRNA_152 0.61 1.6
380,885 - 8520 mRNA_152 0.61 0.0
380,887 - 8520 mRNA_152 0.62 0.7
380,887 - 8520 mRNA_152 0.62 -0.0
380,889 - 8520 mRNA_152 0.62 0.2
380,893 - 8520 mRNA_152 0.62 0.4
380,903 - 8520 mRNA_152 0.63 1.3
380,904 + 8520 mRNA_152 0.63 0.5
380,904 + 8520 mRNA_152 0.63 -0.2
380,908 - 8520 mRNA_152 0.64 0.7
380,908 + 8520 mRNA_152 0.64 0.4
380,911 - 8520 mRNA_152 0.64 -0.5
380,912 + 8520 mRNA_152 0.64 -0.2
380,918 - 8520 mRNA_152 0.64 0.1
380,925 - 8520 mRNA_152 0.65 -0.7
380,926 + 8520 mRNA_152 0.65 2.4
380,952 + 8520 mRNA_152 0.68 1.0
380,994 - 8520 mRNA_152 0.72 0.2
381,041 - 8520 mRNA_152 0.76 0.8
381,050 - 8520 mRNA_152 0.77 -0.4
381,055 + 8520 mRNA_152 0.78 -1.3
381,058 + 8520 mRNA_152 0.78 -0.4
381,111 - 8520 mRNA_152 0.83 -0.7
381,198 - -0.4
381,199 - -0.9
381,437 + -0.3
381,616 - -0.4
382,216 + 0.4