Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_89

Experiments: 40 hrs Low Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_89: 8457 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 213359 to 214966 8457 mRNA_90: 8458 - Hypothetical Protein, at 215330 to 215955 8458

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs Low Buoyancy
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212,375 - -0.3
212,410 - 0.1
212,494 + -1.0
212,502 - -0.2
212,504 - 0.4
212,508 + 0.7
212,512 - -0.4
212,524 + 0.1
212,544 - 0.3
212,623 + 0.1
212,623 + 1.5
212,641 + 0.4
212,645 + 0.2
212,652 + 0.6
212,652 - 0.6
212,658 + -0.0
212,663 - -0.2
212,669 + 0.3
212,670 - 0.1
212,677 - -0.4
212,695 - 0.6
212,695 + 0.0
212,801 - -0.3
212,807 + -0.6
212,811 + -0.4
212,821 + 0.8
212,835 - 1.4
212,844 - 1.2
212,853 + 0.0
212,855 + 0.1
212,873 + 0.1
212,875 - -0.2
212,880 + -0.4
212,880 + 0.5
212,900 - 1.0
212,901 - -0.3
212,906 - -0.8
212,933 - 0.3
212,940 - -0.2
212,950 - 0.9
212,961 - 0.2
212,983 + 0.9
213,005 - 0.7
213,025 - -0.1
213,029 + 1.6
213,039 - -1.0
213,043 + 0.5
213,053 + 0.6
213,059 - 0.3
213,066 - 0.5
213,067 + 0.5
213,073 + 0.1
213,074 + -0.0
213,099 + 0.5
213,110 - 0.4
213,112 + 0.2
213,118 + -0.2
213,122 + -0.5
213,125 - -0.2
213,126 + 1.5
213,126 + 0.0
213,127 - 0.1
213,139 + 0.7
213,141 - -0.6
213,156 + 0.3
213,158 + 0.0
213,159 + -0.2
213,165 - -0.3
213,168 - -0.9
213,175 - 1.4
213,292 - 0.5
213,334 + -0.6
213,340 - 0.5
213,345 + -1.5
213,361 + 0.5
213,367 + -0.4
213,459 - 0.2
213,460 + -0.6
213,466 - 0.1
213,475 + -0.3
213,484 + -0.0
213,507 - -0.3
213,510 + -0.1
213,679 - 8457 mRNA_89 0.20 0.2
213,762 - 8457 mRNA_89 0.25 -0.6
213,793 + 8457 mRNA_89 0.27 -0.7
214,219 + 8457 mRNA_89 0.53 0.3
214,384 + 8457 mRNA_89 0.64 0.7
214,528 - 8457 mRNA_89 0.73 -0.4
214,647 - 8457 mRNA_89 0.80 -0.3
215,100 + -0.6
215,561 - 8458 mRNA_90 0.37 -0.1
215,827 + 8458 mRNA_90 0.79 -2.0
215,848 + 8458 mRNA_90 0.83 -0.2
215,849 - 8458 mRNA_90 0.83 1.2