Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_88
Experiments: 40 hrs Low Buoyancy
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).
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Per-strain Table
| Position | Strand | Gene | Sysname | Fraction | 40 hrs Low Buoyancy |
|---|---|---|---|---|---|
| remove | |||||
| 209,692 | - | 8455 | mRNA_87 | 0.84 | 0.3 |
| 209,713 | + | 8455 | mRNA_87 | 0.85 | -0.8 |
| 209,740 | - | 8455 | mRNA_87 | 0.86 | 0.5 |
| 209,807 | + | 8455 | mRNA_87 | 0.88 | 0.7 |
| 209,891 | + | -0.5 | |||
| 210,158 | - | 0.3 | |||
| 210,162 | + | -0.2 | |||
| 210,167 | - | -0.2 | |||
| 210,173 | - | 0.1 | |||
| 210,176 | + | -1.0 | |||
| 210,179 | - | -0.2 | |||
| 210,179 | - | -0.5 | |||
| 210,307 | + | 0.9 | |||
| 210,320 | - | 0.3 | |||
| 210,321 | - | 1.2 | |||
| 210,337 | + | 1.1 | |||
| 210,345 | + | -0.1 | |||
| 210,368 | - | 0.3 | |||
| 210,399 | - | -0.3 | |||
| 210,407 | - | 1.0 | |||
| 210,418 | + | 0.1 | |||
| 210,431 | + | -0.2 | |||
| 210,439 | - | 0.1 | |||
| 210,449 | - | 0.1 | |||
| 210,453 | - | -0.8 | |||
| 210,460 | - | 0.2 | |||
| 210,476 | - | 0.6 | |||
| 210,487 | + | -1.0 | |||
| 210,546 | - | -0.4 | |||
| 210,568 | + | -0.9 | |||
| 210,579 | + | -0.1 | |||
| 210,593 | - | -0.8 | |||
| 210,600 | + | -1.3 | |||
| 210,603 | - | -0.1 | |||
| 210,604 | + | -0.0 | |||
| 210,610 | - | 1.6 | |||
| 210,628 | + | 0.4 | |||
| 210,630 | + | 0.5 | |||
| 210,637 | + | 0.8 | |||
| 210,639 | - | 0.3 | |||
| 210,639 | + | 1.1 | |||
| 210,645 | + | -0.5 | |||
| 210,654 | - | -0.7 | |||
| 210,662 | + | 0.1 | |||
| 210,663 | + | -0.1 | |||
| 210,672 | + | -2.6 | |||
| 210,684 | - | 0.4 | |||
| 210,772 | + | -0.5 | |||
| 210,794 | + | -2.0 | |||
| 210,797 | - | -0.6 | |||
| 211,078 | + | 8456 | mRNA_88 | 0.26 | -1.3 |
| 211,503 | + | 8456 | mRNA_88 | 0.52 | -0.3 |
| 211,523 | + | 8456 | mRNA_88 | 0.54 | 1.8 |
| 211,771 | - | 8456 | mRNA_88 | 0.69 | 0.1 |
| 211,778 | + | 8456 | mRNA_88 | 0.69 | 0.9 |
| 212,220 | + | 0.2 | |||
| 212,226 | + | -0.5 | |||
| 212,375 | - | -0.3 | |||
| 212,410 | - | 0.1 | |||
| 212,494 | + | -1.0 | |||
| 212,502 | - | -0.2 | |||
| 212,504 | - | 0.4 | |||
| 212,508 | + | 0.7 | |||
| 212,512 | - | -0.4 | |||
| 212,524 | + | 0.1 | |||
| 212,544 | - | 0.3 | |||
| 212,623 | + | 0.1 | |||
| 212,623 | + | 1.5 | |||
| 212,641 | + | 0.4 | |||
| 212,645 | + | 0.2 | |||
| 212,652 | + | 0.6 | |||
| 212,652 | - | 0.6 | |||
| 212,658 | + | -0.0 | |||
| 212,663 | - | -0.2 | |||
| 212,669 | + | 0.3 | |||
| 212,670 | - | 0.1 | |||
| 212,677 | - | -0.4 | |||
| 212,695 | - | 0.6 | |||
| 212,695 | + | 0.0 | |||
| 212,801 | - | -0.3 | |||
| 212,807 | + | -0.6 | |||
| 212,811 | + | -0.4 | |||
| 212,821 | + | 0.8 | |||
| 212,835 | - | 1.4 | |||
| 212,844 | - | 1.2 | |||
| 212,853 | + | 0.0 | |||
| 212,855 | + | 0.1 | |||
| 212,873 | + | 0.1 | |||
| 212,875 | - | -0.2 | |||
| 212,880 | + | -0.4 | |||
| 212,880 | + | 0.5 | |||
| 212,900 | - | 1.0 | |||
| 212,901 | - | -0.3 | |||
| 212,906 | - | -0.8 | |||
| 212,933 | - | 0.3 | |||
| 212,940 | - | -0.2 | |||
| 212,950 | - | 0.9 | |||
| 212,961 | - | 0.2 | |||
| 212,983 | + | 0.9 | |||
| 213,005 | - | 0.7 | |||
| 213,025 | - | -0.1 | |||
| 213,029 | + | 1.6 | |||
| 213,039 | - | -1.0 | |||
| 213,043 | + | 0.5 | |||
| 213,053 | + | 0.6 | |||
| 213,059 | - | 0.3 | |||
| 213,066 | - | 0.5 | |||
| 213,067 | + | 0.5 | |||
| 213,073 | + | 0.1 | |||
| 213,074 | + | -0.0 | |||
| 213,099 | + | 0.5 | |||
| 213,110 | - | 0.4 | |||
| 213,112 | + | 0.2 | |||
| 213,118 | + | -0.2 | |||
| 213,122 | + | -0.5 | |||
| 213,125 | - | -0.2 | |||
| 213,126 | + | 1.5 | |||
| 213,126 | + | 0.0 | |||
| 213,127 | - | 0.1 | |||
| 213,139 | + | 0.7 | |||
| 213,141 | - | -0.6 | |||
| 213,156 | + | 0.3 | |||
| 213,158 | + | 0.0 | |||
| 213,159 | + | -0.2 | |||
| 213,165 | - | -0.3 | |||
| 213,168 | - | -0.9 | |||
| 213,175 | - | 1.4 |